HEADER DNA BINDING PROTEIN/DNA 07-JUL-97 1TC3 . COMPND 2 MOLECULE: DNA (5'- . SOURCE 2 SYNTHETIC: YES; . AUTHOR G.VAN POUDEROYEN,R.F.KETTING,A.PERRAKIS,R.H.A.PLASTERK, . flagSetFrame DONE ==== Generated by WOLFc v1.01 (last modified 28.04.2002) . ==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=1-NOV-2009 . ==== REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . 51 # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA X-CB Y-CB Z-CB N-H.O=C C=O.H-N N-H.O=C C=O.H-N N-H.O=C C=O.H-N X1 Y1 Z1 X2 Y2 Z2 X3 Y3 Z3 1 202 C P 0 0 170 0, 0.0 4,-0.1 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0-159.3 9.8 123.2 34.7 11.0 124.1 34.5 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 -0.7003 0.7137 0.0122 -0.4780 -0.4815 0.7346 0.5302 0.5087 0.6783 2 203 C R + 0 0 260 2,-0.1 2,-0.3 1,-0.0 0, 0.0 0.000 360.0 11.0 -71.8 -17.7 6.8 125.3 33.9 6.4 126.7 34.4 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 -0.6160 0.1335 -0.7764 -0.2724 -0.9608 0.0509 -0.7392 0.2429 0.6282 3 204 C G S S- 0 0 47 1,-0.0 -1,-0.0 0, 0.0 0, 0.0 0.000 96.9 -68.5-146.9 174.7 7.8 125.1 30.3 7.8 126.4 29.7 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.4780 -0.3905 -0.7868 -0.5595 -0.8259 0.0700 -0.6771 0.4068 -0.6133 4 205 C S - 0 0 83 -2,-0.3 3,-0.1 1,-0.1 -2,-0.1 0.000 51.7-103.5 -68.8 153.6 10.0 123.2 27.9 9.7 122.8 26.5 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.9699 -0.0366 -0.2406 0.2101 -0.3731 0.9037 -0.1229 -0.9271 -0.3541 5 206 C A - 0 0 74 1,-0.1 2,-0.4 -4,-0.1 -1,-0.1 0.000 51.3 -81.6 -71.9 158.8 13.7 123.5 27.8 14.7 122.5 28.3 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.6742 0.4426 -0.5912 -0.3591 0.8960 0.2613 0.6454 0.0361 0.7630 6 207 C L - 0 0 9 1,-0.1 -1,-0.1 4,-0.1 2,-0.0 0.000 42.5-132.1 -72.8 127.4 15.3 125.6 25.1 16.2 126.9 25.2 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.3856 -0.1009 -0.9171 -0.8869 -0.3145 -0.3383 -0.2543 0.9439 -0.2108 7 208 C S > - 0 0 45 -2,-0.4 4,-3.4 1,-0.1 5,-0.4 0.000 25.3-108.5 -71.4 154.2 15.8 124.0 21.8 14.8 123.8 20.7 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.7183 -0.0559 -0.6935 0.5711 -0.5218 0.6336 -0.3973 -0.8512 -0.3429 8 209 C D H > S+ 0 0 113 1,-0.2 4,-0.8 2,-0.2 -1,-0.1 0.000 121.8 50.9 -53.2 -34.8 19.1 124.2 20.0 19.9 123.1 19.4 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.4070 0.6705 -0.6203 0.0306 0.6687 0.7429 0.9129 -0.3213 0.2517 9 210 C T H > S+ 0 0 84 2,-0.2 4,-2.7 3,-0.2 -1,-0.2 0.000 110.3 47.1 -66.4 -52.7 17.4 126.5 17.5 16.1 126.3 16.7 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 -0.2239 0.9741 -0.0303 0.9737 0.2222 -0.0496 -0.0416 -0.0406 -0.9983 10 211 C E H > S+ 0 0 29 1,-0.3 4,-2.7 2,-0.2 3,-0.4 0.000 114.7 46.9 -54.2 -55.6 15.9 128.8 20.1 15.0 128.4 21.3 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.4187 0.6716 0.6113 0.1104 0.6305 -0.7683 -0.9014 0.3892 0.1898 11 212 C R H X S+ 0 0 72 -4,-3.4 4,-1.0 1,-0.2 -1,-0.3 0.000 110.1 55.5 -60.1 -21.3 19.2 129.0 21.9 19.9 128.0 22.7 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.8658 0.4488 -0.2211 -0.4532 0.8908 0.0334 0.2120 0.0713 0.9747 12 213 C A H X S+ 0 0 51 -4,-0.8 4,-1.4 -5,-0.4 -1,-0.2 0.000 107.8 47.1 -76.3 -37.2 20.7 129.6 18.5 20.6 128.7 17.3 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.1861 0.7708 -0.6093 0.6464 0.3710 0.6667 0.7400 -0.5179 -0.4292 13 214 C Q H >X S+ 0 0 89 -4,-2.7 4,-3.0 -3,-0.4 3,-0.9 0.000 109.0 55.3 -64.5 -54.6 18.5 132.5 17.9 17.0 132.4 17.9 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.0197 0.9437 0.3302 0.8010 0.1827 -0.5700 -0.5983 0.2758 -0.7523 14 215 C L H 3X S+ 0 0 0 -4,-2.7 4,-1.6 1,-0.3 -1,-0.2 0.000 104.7 54.3 -47.0 -34.9 19.3 133.9 21.3 19.2 133.0 22.5 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.7893 0.4601 0.4067 -0.2704 0.8550 -0.4426 -0.5513 0.2394 0.7992 15 216 C D H 3X S+ 0 0 61 -4,-1.0 4,-1.2 -5,-0.3 -1,-0.3 0.000 111.8 42.3 -73.6 -34.4 22.9 133.7 20.6 23.9 132.6 20.3 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.6900 0.5983 -0.4074 -0.2252 0.7124 0.6647 0.6879 -0.3669 0.6263 16 217 C V H S+ 0 0 28 -4,-3.0 5,-2.6 1,-0.3 4,-0.4 0.000 107.7 51.1 -54.1 -40.5 20.2 138.2 19.0 18.9 137.8 19.6 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.0660 0.7723 0.6318 0.4130 0.5553 -0.7218 -0.9083 0.3086 -0.2824 18 219 C K H ><5S+ 0 0 114 -4,-1.6 3,-1.4 -5,-0.4 -1,-0.3 0.000 107.0 53.9 -65.1 -39.7 22.5 138.9 21.8 23.1 137.8 22.6 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.8197 0.5617 0.1125 -0.5629 0.8262 -0.0237 -0.1062 -0.0439 0.9934 19 220 C L H 3<5S+ 0 0 133 -4,-1.2 -2,-0.3 1,-0.3 -1,-0.2 0.000 108.6 49.8 -58.8 -37.6 25.2 139.4 19.3 25.5 138.5 18.1 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.2255 0.7841 -0.5783 0.3573 0.4856 0.7978 0.9063 -0.3865 -0.1706 20 221 C L T 3<5S- 0 0 121 -4,-1.9 -1,-0.3 -5,-0.0 -2,-0.2 0.000 115.3-120.7 -82.6 0.0 22.8 142.0 17.8 21.6 141.6 16.8 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 -0.4032 0.8921 0.2038 0.9109 0.4127 -0.0047 -0.0883 0.1838 -0.9790 21 222 C N T < 5 + 0 0 148 -3,-1.4 -3,-0.2 -4,-0.4 -2,-0.1 0.000 49.1 172.0 67.5 31.8 22.3 143.5 21.1 23.1 144.9 21.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 -0.7270 0.4676 0.5028 -0.0851 -0.7879 0.6098 0.6813 0.4006 0.6126 22 223 C V < - 0 0 37 -5,-2.6 -1,-0.2 1,-0.1 2,-0.2 0.000 35.8-103.2 -72.7 153.9 18.6 142.9 21.2 17.8 141.8 20.5 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 -0.7381 0.0653 0.6715 0.1054 0.9943 0.0191 -0.6664 0.0848 -0.7408 23 224 C S > - 0 0 59 1,-0.1 4,-3.0 -2,-0.1 5,-0.2 0.000 20.9-118.4 -80.5 151.1 16.8 143.6 24.3 15.8 144.8 24.6 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 -0.4470 -0.4942 0.7457 0.8803 -0.3911 0.2685 0.1590 0.7764 0.6099 24 225 C L H > S+ 0 0 49 1,-0.3 4,-2.7 2,-0.2 5,-0.2 0.000 115.4 50.1 -47.0 -54.3 15.7 141.0 26.7 15.7 141.1 28.2 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 -0.8536 -0.5154 0.0761 0.2668 -0.5579 -0.7859 0.4475 -0.6505 0.6137 25 226 C H H > S+ 0 0 108 1,-0.2 4,-1.8 2,-0.2 -1,-0.3 0.000 110.5 46.9 -59.4 -40.8 12.1 142.0 26.2 11.6 143.4 26.6 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 -0.6943 -0.0998 -0.7127 -0.0471 -0.9819 0.1835 -0.7181 0.1610 0.6770 26 227 C E H > S+ 0 0 72 2,-0.2 4,-3.5 1,-0.2 -1,-0.2 0.000 108.4 57.9 -68.8 -37.9 12.3 142.0 22.4 13.0 143.0 21.5 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 -0.0472 -0.7028 -0.7098 -0.9157 -0.2535 0.3119 -0.3991 0.6647 -0.6316 27 228 C M H X S+ 0 0 2 -4,-3.0 4,-2.3 1,-0.2 6,-0.3 0.000 105.5 49.7 -54.1 -50.8 14.0 138.7 22.5 15.2 138.4 23.4 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 -0.3253 -0.9411 0.0920 -0.3073 0.0131 -0.9515 0.8943 -0.3378 -0.2935 28 229 C S H X>S+ 0 0 17 -4,-2.7 4,-1.2 1,-0.2 5,-0.9 0.000 111.7 47.7 -57.9 -45.7 11.1 137.2 24.4 10.4 137.6 25.7 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 -0.9099 -0.3072 -0.2788 0.4105 -0.7642 -0.4974 -0.0603 -0.5671 0.8215 29 230 C R H ><5S+ 0 0 149 -4,-1.8 3,-0.5 -5,-0.2 -1,-0.2 0.000 107.9 57.1 -61.6 -40.6 8.6 138.5 22.0 8.2 139.9 21.8 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 -0.3258 -0.2759 -0.9043 -0.3423 -0.8572 0.3849 -0.8813 0.4349 0.1848 30 231 C K H 3<5S+ 0 0 115 -4,-3.5 -1,-0.2 1,-0.2 -2,-0.2 0.000 124.2 18.5 -57.8 -46.1 10.6 137.3 19.2 12.0 137.8 18.7 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.0960 -0.8592 -0.5025 -0.9530 0.0663 -0.2955 0.2872 0.5073 -0.8125 31 232 C I H 3<5S- 0 0 22 -4,-2.3 -1,-0.2 2,-0.2 -2,-0.2 0.000 102.8-116.2-114.1 20.6 10.7 133.6 20.2 12.0 133.0 20.4 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 -0.4618 -0.7950 0.3933 -0.7523 0.1162 -0.6485 0.4699 -0.5954 -0.6517 32 233 C S T <<5 + 0 0 104 -4,-1.2 2,-0.3 -3,-0.5 -3,-0.2 0.000 69.0 131.9 50.0 48.4 7.8 133.6 22.6 6.7 132.9 21.8 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 -0.2022 -0.4803 0.8535 0.2009 0.8326 0.5161 -0.9585 0.2758 -0.0718 33 234 C R < - 0 0 46 -5,-0.9 -1,-0.2 -6,-0.3 -2,-0.2 0.000 61.3 -96.9-128.8 149.3 9.9 132.6 25.6 11.3 132.1 25.3 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.2713 0.1692 0.9475 -0.9291 -0.2112 0.3037 0.2515 -0.9627 0.0999 34 235 C S > - 0 0 67 -2,-0.3 4,-1.8 1,-0.1 5,-0.1 0.000 26.4-125.1 -59.6 153.5 10.0 134.1 29.1 9.8 133.2 30.3 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.6219 0.6067 0.4951 -0.3393 0.7786 -0.5278 -0.7058 0.1602 0.6901 35 236 C R H > S+ 0 0 101 1,-0.2 4,-4.2 2,-0.2 -1,-0.1 0.000 107.4 67.4 -66.4 -37.4 12.7 136.6 29.9 12.4 138.0 30.5 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.9087 -0.0181 0.4170 0.3614 -0.4656 -0.8078 0.2088 0.8848 -0.4166 36 237 C H H > S+ 0 0 130 2,-0.2 4,-1.8 1,-0.2 5,-0.3 0.000 104.3 37.5 -50.9 -58.4 13.6 134.4 32.7 12.6 133.7 33.7 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.6253 -0.7700 0.1270 0.7763 0.6303 -0.0010 -0.0792 0.0992 0.9919 37 238 C C H > S+ 0 0 29 1,-0.2 4,-2.8 2,-0.2 5,-0.3 0.000 117.0 52.2 -62.6 -52.3 14.9 131.5 30.7 14.3 130.4 29.9 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.8291 -0.0989 -0.5504 0.5591 0.1546 0.8145 0.0046 -0.9830 0.1835 38 239 C I H X S+ 0 0 0 -4,-1.8 4,-2.3 2,-0.2 -2,-0.2 0.000 111.9 47.7 -43.8 -49.3 16.4 133.8 28.2 15.6 134.9 27.4 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.8410 0.5409 -0.0118 0.5347 -0.8343 -0.1341 -0.0824 0.1065 -0.9909 39 240 C R H >X S+ 0 0 101 -4,-4.2 4,-2.0 2,-0.2 3,-0.7 0.000 111.8 45.7 -55.4 -71.6 18.2 135.7 30.9 17.6 136.4 32.1 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.8408 -0.1606 0.5170 0.5399 0.1778 -0.8227 0.0402 0.9709 0.2362 40 241 C V H 3X S+ 0 0 72 -4,-1.8 4,-0.8 1,-0.3 3,-0.2 0.000 114.1 50.7 -38.7 -52.0 19.6 132.8 32.8 18.8 131.7 33.4 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.7119 -0.6755 -0.1919 0.7022 0.6877 0.1841 0.0076 -0.2658 0.9640 41 242 C Y H >< S+ 0 0 7 -4,-2.8 3,-0.9 -5,-0.3 -1,-0.3 0.000 110.0 47.2 -58.2 -48.2 20.8 131.1 29.5 19.9 130.7 28.4 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.7533 0.1078 -0.6488 0.6367 -0.3663 0.6785 -0.1645 -0.9242 -0.3446 42 243 C L H << S+ 0 0 33 -4,-2.3 -1,-0.2 -3,-0.7 -2,-0.2 0.000 101.6 65.6 -68.7 -22.6 22.6 134.1 28.1 22.0 135.4 27.5 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.8518 0.4888 0.1885 0.5222 -0.8208 -0.2314 0.0416 0.2955 -0.9544 43 244 C K H 3< S- 0 0 179 -4,-2.0 -1,-0.2 1,-0.3 -2,-0.2 0.000 133.3 -6.1 -68.0 -23.5 24.3 134.6 31.4 23.6 134.9 32.8 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.8754 -0.2649 0.4043 0.4830 0.5097 -0.7120 -0.0175 0.8186 0.5742 44 245 C D << + 0 0 69 -3,-0.9 4,-0.5 -4,-0.8 -1,-0.3 0.000 65.5 176.5-172.1 89.5 26.0 131.3 30.7 26.4 130.8 32.1 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.0897 -0.9160 -0.3910 0.3252 0.3980 -0.8578 0.9414 -0.0502 0.3336 45 246 C P S > S+ 0 0 51 0, 0.0 3,-0.6 0, 0.0 -3,-0.1 0.000 81.8 60.2 -68.7 -35.2 24.9 129.4 27.7 25.1 130.0 26.3 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.0041 -0.9447 -0.3279 -0.6978 -0.2375 0.6758 -0.7163 0.2260 -0.6602 46 247 C V T 3 S+ 0 0 116 1,-0.2 4,-0.1 -4,-0.1 -2,-0.0 0.000 100.5 52.1 -52.9 -66.5 27.5 126.8 28.3 28.9 127.0 28.8 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 -0.0053 -0.8708 0.4917 -0.5470 -0.4091 -0.7304 0.8371 -0.2728 -0.4741 47 248 C S T > S+ 0 0 63 2,-0.1 3,-2.5 -6,-0.1 -1,-0.2 0.000 83.6 114.6 -48.2 -18.2 26.2 125.7 31.7 26.5 126.5 33.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 -0.7976 -0.4603 0.3898 0.2855 -0.8574 -0.4283 0.5313 -0.2303 0.8153 48 249 C Y T < S+ 0 0 77 -3,-0.6 3,-0.1 -4,-0.5 -7,-0.0 0.000 81.2 20.6 -60.4 131.9 22.8 125.3 30.2 22.2 126.0 29.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 -0.5547 -0.7985 -0.2339 -0.1244 -0.1984 0.9722 -0.8227 0.5683 0.0107 49 250 C G T 3 S+ 0 0 75 1,-0.2 2,-1.0 -2,-0.1 -1,-0.3 0.000 91.8 121.4 88.3 -2.8 21.8 121.7 30.4 22.2 121.4 29.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.3312 -0.8898 0.3139 -0.7429 -0.0408 0.6681 -0.5817 -0.4545 -0.6746 50 251 C T < 0 0 98 -3,-2.5 -1,-0.2 1,-0.1 -3,-0.0 0.000 360.0 360.0 -95.0 94.1 24.4 121.0 33.2 25.7 121.8 33.3 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0.0698 -0.2848 0.9560 -0.3839 -0.8922 -0.2378 0.9207 -0.3504 -0.1716 51 252 C S 0 0 172 -2,-1.0 -1,-0.1 -3,-0.1 -3,-0.0 0.000 360.0 360.0-154.9 360.0 22.3 119.7 36.1 21.0 120.6 36.1 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 0 0.0 -0.3559 -0.6271 0.6929 0.9000 -0.0302 0.4349 -0.2518 0.7784 0.5751 printout DONE